BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B10SP1|AL426965
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1317 1080 0.0
3x_Contig1598 767 0.0
>3x_Contig1317
Length = 5616
Score = 1080 bits (542), Expect = 0.0
Identities = 543/544 (99%)
Strand = Plus / Plus
Query: 1 gatctgaattcttgaacaaatggaaactagaacaggaagctctcaggctaaaaagagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5068 gatctgaattcttgaacaaatggaaactagaacaggaagctctcaggctaaaaagagagc 5127
Query: 61 aggaaatagaggaagagcgcaagaagctcgaaaaggagacaaaatccaacacgaagtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5128 aggaaatagaggaagagcgcaagaagctcgaaaaggagacaaaatccaacacgaagtatc 5187
Query: 121 gttactaccatctatatcgcgagggggaactagaagaggattgccaaatggccggaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5188 gttactaccatctatatcgcgagggggaactagaagaggattgccaaatggccggaggaa 5247
Query: 181 taatagttggacaaggttacgaaaaggataattggtacgtagttgctagaaagcctggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5248 taatagttggacaaggttacgaaaaggataattggtacgtagttgctagaaagcctggca 5307
Query: 241 acccttaacgattgctaatataatatataaacagcataaatattacatcgaaatatactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5308 acccttaacgattgctaatataatatataaacagcataaatattacatcgaaatatactt 5367
Query: 301 ttatagacaacagctagtactcattgcaatttctttgtttggtttattagtgtttcttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5368 ttatagacaacagctagtactcattgcaatttctttgtttggtttattagtgtttcttac 5427
Query: 361 gatattctgacggtgcactaaatttctgtttcgttctcatgaacatttaacgaaaaaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5428 gatattctgacggtgcactaaatttctgtttcgttctcatgaacatttaacgaaaaaacg 5487
Query: 421 ggaaactttaacaggcaggccaacttaaccagaaaagtgcaggaggatatagattcgagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5488 ggaaactttaacaggcaggccaacttaaccagaaaagtgcaggaggatatagattcgagt 5547
Query: 481 ttactgataagctacattaactatactgcatatattagctgtgaatgtataahattgaca 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5548 ttactgataagctacattaactatactgcatatattagctgtgaatgtataaaattgaca 5607
Query: 541 accc 544
||||
Sbjct: 5608 accc 5611
>3x_Contig1598
Length = 11902
Score = 767 bits (385), Expect = 0.0
Identities = 410/421 (97%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 536 tgacaacccagtatttttggcattgagatccgaattahagtatatctgcttgagcgtact 595
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 11902 tgacaacccagtatttttggcattgagatccgagggaaagtatatctgcttgagcgtact 11843
Query: 596 gtgatttgthacgaaccttaahatgccagtyattgaacataatgatcaacgatttgaact 655
||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 11842 gtgatttgtaacgaaccttaaaatgccagtaattgaacataatgatcaacgatttgaact 11783
Query: 656 ctcccactcagaagagcaaaagctcaacgagtttcaaatgataacgtctttccccactga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11782 ctcccactcagaagagcaaaagctcaacgagtttcaaatgataacgtctttccccactga 11723
Query: 716 tgaattgcctaatgttataaagcttctacgcaatcattcttggcaattggaacacgcttt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11722 tgaattgcctaatgttataaagcttctacgcaatcattcttggcaattggaacacgcttt 11663
Query: 776 gggtagatatttcgacgacaattggaaagawaatctagactttgcaccacagcctacacc 835
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11662 gggtagatatttcgacgacaattggaaagaaaatctagactttgcaccacagcctacacc 11603
Query: 836 cgctcaaaacacaattcctgtcc-acaatcacaatctgatgagcgccagatcctggraga 894
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 11602 cgctcaaaacacaattcctgtccaacaatcacaatctgatgagcgccagatcctggaaga 11543
Query: 895 tacgcgttcagaattaccaatatcactgagaatcccaaacattttggagracccgtttgg 954
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11542 tacgcgttcagaattaccaatatcactgagaatcccaaacattttggagaacccgtttgg 11483
Query: 955 a 955
|
Sbjct: 11482 a 11482
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6341
Number of Sequences: 1807
Number of extensions: 6341
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)